I'm sure there will be a long list for some, but here's a surprising one for me:
-oceans

So I'm not looking for rare songs, I'm looking for wicked commonly played songs that you just somehow have never seen live.

I've also never seen Fuckin Up, Evacuation, and I Am Mine, which I really don't mind too much.

Ditto to every single song you just mentioned!

Okay, some other not-so-rare tunes I've never seen:

Release
Indifference
Whipping
Long Road
Insignificance
Grievance
Save You

...all of those are pretty commonly played songs. And in the not-as-common-but-not-as-rare-as-to-be-full-on-rarities column:

Rats
In My Tree
Off He Goes
Red Mosquito
Faithfull
In Hiding
Marker In The Sand
Comatose

Of the commonly played:

Once

Daughter
Once
Go
Hail, Hail
Not For You
Blood
Save You
Grievance
Fuckin' Up
Baba O'Riley
Last Kiss
Oceans
I Am Mine

Those are all pretty common.

spenno, how'd you miss Comatose?

Fuckin' Up
Light Years
Red Mosquito
Tremor Christ
Sometimes
Big Wave
Oceans (I doubt I'll ever hear it)

I wouldn't call Tremor Christ a commonly played song, at least not anymore.

I've never seen Black, maybe at Lolla

There is a few, But most importantly. I have been dying for years to be at a show where parting ways is played. Literally dying for it. I don't think I will ever get it.

I'm dying with you, buddy.

you win

betterman
save you


i have been just to one show,but i didnt get any of those two commonly played songs.

Garden
Marker In The Sand

Other than that I have them play seen almost of the songs on their studio albums.

Oceans was quite elusive though. I was at the Greenville, South Carolina show in 1998 But I was ten minutes late getting into the venue and fucking missed it. Finally got it in San Diego 2006.

If you go to the setlist archive, you can hear the version of Oceans you missed. I'm listening to it now. Pretty good.

Put me down for Tremor Christ too. I saw them several times when it was a regular but never at one of shows.
I'd like to hear Can't Keep but that doesn't seem likely anymore. But I've been lucky with Parting Ways, Rival and Hard to Imagine.
Of course there's several Pearl Jam tracks but I usually don't think of them when coming up with these kinds of lists.

Parting Ways was a good one. The end of the song sounded quite spacey due to the weird acoustics. Rival was boring as hell. zzzzz

I've also never seen Leaving Here or Soon Forget

I've never seen those either. I forgot to put them on my list.

any avocado song, any binaural song that's not evactuation.

Dead Man
I've been to (2) shows that Ed did in pre-set and missed it both times.
I'm guessing I was boozing in the parking lot.

After 7 pj shows in europe since 1996 having not heard yet release, indifference or wma as a tag in daughter is really painful not to talk about personal favourites which are played less often as garden, rats or footsteps...

Let's see if i'm fortunate enough during the next days to change it...